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Sepúlveda-Torres L.d.C., Rishishwar L., Rogers M.L., Ríos-Olivares E., Boukli N., Jordan I.K., Cubano L.A. (2017) A decade of viral mutations and associated drug resistance in a population of HIV-1+ Puerto Ricans: 2002–2011.  PLoS ONE. E 12(5): e0177452.

Rishishwar, L. and Jordan I.K., 2017. Implications of human evolution and admixture for mitochondrial replacement therapy.  BMC Genomics. 18: 140.

Rishishwar, L., Wang, L., Clayton, E.A., Mariño-Ramírez, L., McDonald, J.F. and Jordan I.K., 2017. Population and clinical genetics of human transposable elements in the (post) genomic era. Mob Genet Elements. 7: 1-20.

Gupta, A., Jordan, I.K., Rishishwar, L., 2017. stringMLST: a fast k-mer based tool for multi locus sequence typing. Bioinformatics. 33: 119-121.


Wang, L., Rishishwar, L., Mariño-Ramírez, L. and Jordan I.K., 2016. Human population-specific gene expression and transcriptional network modification with polymorphic transposable elements. Nuc. Acids Res. In Press

Rishishwar, L., Mariño-Ramírez, L., and Jordan, I.K., 2016. Benchmarking computational tools for polymorphic transposable element detection.  Brief Bioinform. doi: 10.1093/bib/bbw072

Clayton, E.A., Wang, L., Rishishwar, L., Wang, J., McDonald, J.F. and Jordan I.K., 2016. Patterns of transposable element expression and insertion in cancer. Front. Mol. Biosci. 3: 76.

Watve, S., Chande, A.T., Rishishwar, L., Bernardy, E.E., Mariño-Ramírez, L., Jordan, I.K., Hammer, B.K., 2016. Whole genome sequence of 26 environmental Vibrio cholerae isolates. Genome Announcements. 4: e01396-16

Hu, F., Rishishwar, L., Sivadas, A., Mitchell, G.J., Jordan, I.K., Murphy, T.F., Gilsdorf, J.R., Mayer, L.W., and Wang, X., 2016. Comparative genomic analysis of Haemophilus haemolyticus and non-typeable Haemophilus influenzae and a new testing scheme for their discrimination. J. Clin. Micro. 54: 3010-3017.

Orata, F.D., Xu, Y., Gladney, L.M., Rishishwar, L., Case, R.J., Boucher, Y., Jordan, I.K., Tarr, C.L., 2016. Characterization of clinical and environmental isolates of Vibrio cidicii sp. nov., a close relative of Vibrio navarrensis. Int J Syst Evol Microbiol. 66: 4148-4155.

Rishishwar, L., Kraft, C.S., Jordan, I.K., 2016. Population genomics of reduced vancomycin susceptibility in Staphylococcus aureus. mSphere. 1: e00094-16

Medina Rivas, M.A., Norris, E.T., Rishishwar, L., Conley, A.B., Medrano Trochez, C., Valderrama-Aguirre, A., Vannberg, F.O., Mariño-Ramírez, L., and Jordan, I.K., 2016. El Chocó Colombia: a hotspot of human biodiversity. Rev. Biodivers. Neotrop. 6: 45-54

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